Nanopublication

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ID

http://purl.org/np/RA_DSGIL9AJ5Dlf-BL9hv-0tEYv3nT_ncwbVTdlyAQaA0

Formats

.trig | .trig.txt | .jelly | .jelly.txt

Content

@prefix this: <http://purl.org/np/RA_DSGIL9AJ5Dlf-BL9hv-0tEYv3nT_ncwbVTdlyAQaA0> .
@prefix sub: <http://purl.org/np/RA_DSGIL9AJ5Dlf-BL9hv-0tEYv3nT_ncwbVTdlyAQaA0#> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix prov: <http://www.w3.org/ns/prov#> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  sub:assertion a nt:AssertionTemplate;
    dct:description """<p>Such a nanopublication expresses an association between two organism instances (subject and object), for example expressing that one subject individual ate the object individual.</p>

<p>For expressing interactions or more general knowledge between classes of organisms (taxa), please use the alternative template \"Associations between taxa\".</p>""";
    rdfs:label "Expressing an association between two individual organisms";
    nt:hasStatement sub:st00, sub:st10, sub:st11, sub:st12, sub:st20, sub:st30, sub:st40,
      sub:st41, sub:st42, sub:st50, sub:st60;
    nt:hasTag "Biodiversity" .
  
  sub:obj a nt:IntroducedResource, nt:LocalResource;
    rdfs:label "the object organism" .
  
  sub:objAlt a nt:ExternalUriPlaceholder;
    rdfs:label "existing URI identifier of the object organism (e.g. of digital collection specimen or observation in nature); if unknown leave it blank" .
  
  sub:objlifecyclestage a nt:GuidedChoicePlaceholder;
    rdfs:label "search and select the life cycle stage of the object organism; leave blank if unknown";
    nt:possibleValuesFrom <http://purl.org/np/RAVZS2MV-siFEqsgFTtgSoKA5qJkp7r1nM_n-MqPkvgdE> .
  
  sub:objtaxon a nt:LocalResource;
    rdfs:label "the object taxon" .
  
  sub:objtaxondef a nt:ExternalUriPlaceholder;
    rdfs:label "taxon concept reference (https://doi.org/... or https://treatment.plazi.org/id/...)" .
  
  sub:objtaxonname a nt:GuidedChoicePlaceholder;
    rdfs:label "the taxon name of the object organism";
    nt:possibleValuesFromApi "https://vodex.petapico.org/nidx/query?rows=100&q=label:" .
  
  sub:relation a nt:RestrictedChoicePlaceholder;
    rdfs:label "the relation between the two organisms";
    nt:possibleValuesFrom <http://purl.org/np/RAodaWZBY-yDEtl9reYazBfI-YVD5L4zPh8RrVFS0kbEo> .
  
  sub:st00 rdf:object sub:obj;
    rdf:predicate sub:relation;
    rdf:subject sub:subj .
  
  sub:st10 rdf:object sub:subjtaxon;
    rdf:predicate rdf:type;
    rdf:subject sub:subj .
  
  sub:st11 rdf:object sub:subjtaxonname;
    rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonName>;
    rdf:subject sub:subjtaxon .
  
  sub:st12 a nt:OptionalStatement;
    rdf:object sub:subjtaxondef;
    rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition>;
    rdf:subject sub:subjtaxon .
  
  sub:st20 a nt:OptionalStatement;
    rdf:object sub:subjlifecyclestage;
    rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasCycleStage>;
    rdf:subject sub:subj .
  
  sub:st30 a nt:OptionalStatement, nt:RepeatableStatement;
    rdf:object sub:subjAlt;
    rdf:predicate <http://www.w3.org/2002/07/owl#sameAs>;
    rdf:subject sub:subj .
  
  sub:st40 rdf:object sub:objtaxon;
    rdf:predicate rdf:type;
    rdf:subject sub:obj .
  
  sub:st41 rdf:object sub:objtaxonname;
    rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonName>;
    rdf:subject sub:objtaxon .
  
  sub:st42 a nt:OptionalStatement;
    rdf:object sub:objtaxondef;
    rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition>;
    rdf:subject sub:objtaxon .
  
  sub:st50 a nt:OptionalStatement;
    rdf:object sub:objlifecyclestage;
    rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasCycleStage>;
    rdf:subject sub:obj .
  
  sub:st60 a nt:OptionalStatement, nt:RepeatableStatement;
    rdf:object sub:objAlt;
    rdf:predicate <http://www.w3.org/2002/07/owl#sameAs>;
    rdf:subject sub:obj .
  
  sub:subj a nt:IntroducedResource, nt:LocalResource;
    rdfs:label "the subject organism" .
  
  sub:subjAlt a nt:ExternalUriPlaceholder;
    rdfs:label "existing URI identifier of the subject organism (e.g. of digital collection specimen or observation in nature); if unknown leave it blank" .
  
  sub:subjlifecyclestage a nt:GuidedChoicePlaceholder;
    rdfs:label "search and select the life cycle stage of the subject organism; leave blank if unknown";
    nt:possibleValuesFrom <http://purl.org/np/RAVZS2MV-siFEqsgFTtgSoKA5qJkp7r1nM_n-MqPkvgdE> .
  
  sub:subjtaxon a nt:LocalResource;
    rdfs:label "the subject taxon" .
  
  sub:subjtaxondef a nt:ExternalUriPlaceholder;
    rdfs:label "publication DOI (https://doi.org/...) or taxon treatment ID (https://treatment.plazi.org/id/...)" .
  
  sub:subjtaxonname a nt:GuidedChoicePlaceholder;
    rdfs:label "search and select from list";
    nt:possibleValuesFromApi "https://vodex.petapico.org/nidx/query?rows=100&q=label:" .
  
  rdf:type rdfs:label "is identified as a member of" .
  
  <http://www.w3.org/2002/07/owl#sameAs> rdfs:label "is the same as" .
  
  <https://w3id.org/kpxl/biodiv/terms/hasCycleStage> rdfs:label "has the life cycle stage" .
  
  <https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition> rdfs:label "is used according to" .
  
  <https://w3id.org/kpxl/biodiv/terms/hasTaxonName> rdfs:label "has the name - links a taxon usage to a taxon name" .
}

sub:provenance {
  sub:assertion prov:wasAttributedTo orcid:0000-0002-1267-0234 .
}

sub:pubinfo {
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCjDGQCS1S+SRnERDuYDXOugdYUP0efEquHJEEHAbU/uLzBVlga89zqrNPCS7fBE6lArBUWEmT8eLKdMapyqvAzI1J3jUWTMhDJF+XFBkUiuiFfNSc4vJJcmi0yujtnuzXsRIG202jyaP4f5ULoskFwaZOSBZJfiE0dsB3D7DTIAQIDAQAB";
    npx:hasSignature "Az16K1de2MWHXez3e1DZOIdJZXMPQsl0UrDYbbsHxf01zCmGM0AG5YadXHBGDDTT1+emSMVVbiqduYJQdn7vlIFZ22hDWSz6HVivTz+CBA+GdEj7s2FWtaeuWzo0wQEHEYvrqv5coh5nmvs4K3hOC2XtYqKLmlY9C10qtcbUUgo=";
    npx:hasSignatureTarget this: .
  
  this: dct:created "2023-07-05T09:27:04.405Z"^^xsd:dateTime;
    dct:creator orcid:0000-0002-1267-0234;
    dct:license <https://creativecommons.org/licenses/by/4.0/>;
    npx:supersedes <http://purl.org/np/RA1v1zSAxXtHFkc5LBYVGmTZoMBtg-ofF34qzJrDluoPg>;
    nt:wasCreatedFromProvenanceTemplate <http://purl.org/np/RANwQa4ICWS5SOjw7gp99nBpXBasapwtZF1fIM3H2gYTM>;
    nt:wasCreatedFromPubinfoTemplate <http://purl.org/np/RAA2MfqdBCzmz9yVWjKLXNbyfBNcwsMmOqcNUxkk1maIM>,
      <http://purl.org/np/RAh1gm83JiG5M6kDxXhaYT1l49nCzyrckMvTzcPn-iv90>, <http://purl.org/np/RAjpBMlw3owYhJUBo3DtsuDlXsNAJ8cnGeWAutDVjuAuI>;
    nt:wasCreatedFromTemplate <http://purl.org/np/RA5awHTBKJwv0iGa1au6zAor35CtkO-ZQDglzUuq8AT88> .
}