http://purl.org/np/RAVwKmA06UbEfx0NeGBPEaCkM6reUvAZiBTYjf2f4z6Xc
.trig | .trig.txt | .jelly | .jelly.txt
@prefix dcterms: <http://purl.org/dc/terms/> .
@prefix this: <http://purl.org/np/RAVwKmA06UbEfx0NeGBPEaCkM6reUvAZiBTYjf2f4z6Xc> .
@prefix sub: <http://purl.org/np/RAVwKmA06UbEfx0NeGBPEaCkM6reUvAZiBTYjf2f4z6Xc#> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
sub:Head {
this: a np:Nanopublication;
np:hasAssertion sub:assertion;
np:hasProvenance sub:provenance;
np:hasPublicationInfo sub:pubinfo .
}
sub:assertion {
sub:assertion a nt:AssertionTemplate;
dcterms:description """<p>This nanopublication makes a statement that in the context of a thing of a certain type (e.g. a mouse), another thing of a certain type (e.g. a gene) tends to have a relation (such as causing) to another thing of a certain type (e.g. a disease) in the same context.</p>
<p>More information about the super-pattern can be found in <a href=\"https://doi.org/10.1145/3460210.3493561\">this publication</a>.</p>
<p>If the class for the context, subject, or object does not yet exist, you can <a href=\"/publish?template=http://purl.org/np/RA2FrMIx0lsjlUje7iLpQb8kB0KuouQz5EpOaO5gdqwWI&template-version=latest\">mint a new class</a> first.</p>""";
rdfs:label "Expressing a general claim with a super-pattern";
nt:hasStatement sub:st0, sub:st1, sub:st2, sub:st3, sub:st4, sub:st5, sub:st6;
nt:hasTag "Claims" .
sub:contextClass a nt:GuidedChoicePlaceholder;
rdfs:label "URI of the context class";
nt:possibleValue <https://w3id.org/linkflows/superpattern/terms/UniversalContext>;
nt:possibleValuesFromApi "http://purl.org/nanopub/api/find_signed_things?type=http%3A%2F%2Fwww.w3.org%2F2002%2F07%2Fowl%23Class&searchterm=",
"https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search=" .
sub:label a nt:LiteralPlaceholder;
rdfs:label "informal label or text for the whole superpattern instance" .
sub:objectClass a nt:GuidedChoicePlaceholder;
rdfs:label "URI of the object class (B)";
nt:possibleValuesFromApi "http://purl.org/nanopub/api/find_signed_things?type=http%3A%2F%2Fwww.w3.org%2F2002%2F07%2Fowl%23Class&searchterm=",
"https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search=" .
sub:qualifier a nt:RestrictedChoicePlaceholder;
rdfs:label "URI of the qualifier";
nt:possibleValue <https://w3id.org/linkflows/superpattern/terms/alwaysQualifier>,
<https://w3id.org/linkflows/superpattern/terms/canAlwaysQualifier>, <https://w3id.org/linkflows/superpattern/terms/canFrequentlyNotQualifier>,
<https://w3id.org/linkflows/superpattern/terms/canFrequentlyQualifier>, <https://w3id.org/linkflows/superpattern/terms/canGenerallyNotQualifier>,
<https://w3id.org/linkflows/superpattern/terms/canGenerallyQualifier>, <https://w3id.org/linkflows/superpattern/terms/canMostlyNotQualifier>,
<https://w3id.org/linkflows/superpattern/terms/canMostlyQualifier>, <https://w3id.org/linkflows/superpattern/terms/canNeverQualifier>,
<https://w3id.org/linkflows/superpattern/terms/canSometimesNotQualifier>, <https://w3id.org/linkflows/superpattern/terms/canSometimesQualifier>,
<https://w3id.org/linkflows/superpattern/terms/frequentlyNotQualifier>, <https://w3id.org/linkflows/superpattern/terms/frequentlyQualifier>,
<https://w3id.org/linkflows/superpattern/terms/generallyNotQualifier>, <https://w3id.org/linkflows/superpattern/terms/generallyQualifier>,
<https://w3id.org/linkflows/superpattern/terms/mostlyNotQualifier>, <https://w3id.org/linkflows/superpattern/terms/mostlyQualifier>,
<https://w3id.org/linkflows/superpattern/terms/neverQualifier>, <https://w3id.org/linkflows/superpattern/terms/sometimesNotQualifier>,
<https://w3id.org/linkflows/superpattern/terms/sometimesQualifier> .
sub:relation a nt:RestrictedChoicePlaceholder;
rdfs:label "URI of the relation type";
nt:possibleValue <https://w3id.org/linkflows/superpattern/terms/affects>, <https://w3id.org/linkflows/superpattern/terms/causes>,
<https://w3id.org/linkflows/superpattern/terms/comparesTo>, <https://w3id.org/linkflows/superpattern/terms/contributesTo>,
<https://w3id.org/linkflows/superpattern/terms/cooccursWith>, <https://w3id.org/linkflows/superpattern/terms/decreases>,
<https://w3id.org/linkflows/superpattern/terms/enables>, <https://w3id.org/linkflows/superpattern/terms/entails>,
<https://w3id.org/linkflows/superpattern/terms/follows>, <https://w3id.org/linkflows/superpattern/terms/hasCausalRelationWith>,
<https://w3id.org/linkflows/superpattern/terms/hasDifferentValueFrom>, <https://w3id.org/linkflows/superpattern/terms/hasLargerValueThan>,
<https://w3id.org/linkflows/superpattern/terms/hasSameValueAs>, <https://w3id.org/linkflows/superpattern/terms/hasSimilarValueAs>,
<https://w3id.org/linkflows/superpattern/terms/hasSmallerValueThan>, <https://w3id.org/linkflows/superpattern/terms/hasSpatiotemporalRelationWith>,
<https://w3id.org/linkflows/superpattern/terms/includes>, <https://w3id.org/linkflows/superpattern/terms/increases>,
<https://w3id.org/linkflows/superpattern/terms/inhibits>, <https://w3id.org/linkflows/superpattern/terms/isCausedBy>,
<https://w3id.org/linkflows/superpattern/terms/isFollowedBy>, <https://w3id.org/linkflows/superpattern/terms/isIncludedIn>,
<https://w3id.org/linkflows/superpattern/terms/isNecessaryAndSufficientFor>, <https://w3id.org/linkflows/superpattern/terms/isNecessaryFor>,
<https://w3id.org/linkflows/superpattern/terms/isSameAs>, <https://w3id.org/linkflows/superpattern/terms/isSufficientFor>,
<https://w3id.org/linkflows/superpattern/terms/prevents>, <https://w3id.org/linkflows/superpattern/terms/requires> .
sub:spi a nt:IntroducedResource, nt:LocalResource;
rdfs:label "SPI:" .
sub:st0 rdf:object <https://w3id.org/linkflows/superpattern/terms/SuperPatternInstance>;
rdf:predicate rdf:type;
rdf:subject sub:spi .
sub:st1 rdf:object sub:contextClass;
rdf:predicate <https://w3id.org/linkflows/superpattern/terms/hasContextClass>;
rdf:subject sub:spi .
sub:st2 rdf:object sub:subjectClass;
rdf:predicate <https://w3id.org/linkflows/superpattern/terms/hasSubjectClass>;
rdf:subject sub:spi .
sub:st3 rdf:object sub:qualifier;
rdf:predicate <https://w3id.org/linkflows/superpattern/terms/hasQualifier>;
rdf:subject sub:spi .
sub:st4 rdf:object sub:relation;
rdf:predicate <https://w3id.org/linkflows/superpattern/terms/hasRelation>;
rdf:subject sub:spi .
sub:st5 rdf:object sub:objectClass;
rdf:predicate <https://w3id.org/linkflows/superpattern/terms/hasObjectClass>;
rdf:subject sub:spi .
sub:st6 rdf:object sub:label;
rdf:predicate rdfs:label;
rdf:subject sub:spi .
sub:subjectClass a nt:GuidedChoicePlaceholder;
rdfs:label "URI of the subject class (A)";
nt:possibleValuesFromApi "http://purl.org/nanopub/api/find_signed_things?type=http%3A%2F%2Fwww.w3.org%2F2002%2F07%2Fowl%23Class&searchterm=",
"https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search=" .
rdf:type rdfs:label "This is a" .
rdfs:label rdfs:label "Informally, it can be shown as" .
<https://w3id.org/linkflows/superpattern/terms/SuperPatternInstance> rdfs:label "super-pattern instance" .
<https://w3id.org/linkflows/superpattern/terms/UniversalContext> rdfs:label "universal context (i.e. no context restriction)" .
<https://w3id.org/linkflows/superpattern/terms/affects> rdfs:label "A affects B" .
<https://w3id.org/linkflows/superpattern/terms/alwaysQualifier> rdfs:label "always" .
<https://w3id.org/linkflows/superpattern/terms/canAlwaysQualifier> rdfs:label "can always" .
<https://w3id.org/linkflows/superpattern/terms/canFrequentlyNotQualifier> rdfs:label
"can frequently not" .
<https://w3id.org/linkflows/superpattern/terms/canFrequentlyQualifier> rdfs:label
"can frequently" .
<https://w3id.org/linkflows/superpattern/terms/canGenerallyNotQualifier> rdfs:label
"can generally not" .
<https://w3id.org/linkflows/superpattern/terms/canGenerallyQualifier> rdfs:label "can generally" .
<https://w3id.org/linkflows/superpattern/terms/canMostlyNotQualifier> rdfs:label "can mostly not" .
<https://w3id.org/linkflows/superpattern/terms/canMostlyQualifier> rdfs:label "can mostly" .
<https://w3id.org/linkflows/superpattern/terms/canNeverQualifier> rdfs:label "can never" .
<https://w3id.org/linkflows/superpattern/terms/canSometimesNotQualifier> rdfs:label
"can sometimes not" .
<https://w3id.org/linkflows/superpattern/terms/canSometimesQualifier> rdfs:label "can sometimes" .
<https://w3id.org/linkflows/superpattern/terms/causes> rdfs:label "A causes B" .
<https://w3id.org/linkflows/superpattern/terms/comparesTo> rdfs:label "A compares to B" .
<https://w3id.org/linkflows/superpattern/terms/contributesTo> rdfs:label "A contributes to B" .
<https://w3id.org/linkflows/superpattern/terms/cooccursWith> rdfs:label "A co-occurs with B" .
<https://w3id.org/linkflows/superpattern/terms/decreases> rdfs:label "A decreases B" .
<https://w3id.org/linkflows/superpattern/terms/enables> rdfs:label "A enables B" .
<https://w3id.org/linkflows/superpattern/terms/entails> rdfs:label "A entails B" .
<https://w3id.org/linkflows/superpattern/terms/follows> rdfs:label "A follows B" .
<https://w3id.org/linkflows/superpattern/terms/frequentlyNotQualifier> rdfs:label
"frequently not" .
<https://w3id.org/linkflows/superpattern/terms/frequentlyQualifier> rdfs:label "frequently" .
<https://w3id.org/linkflows/superpattern/terms/generallyNotQualifier> rdfs:label "generally not" .
<https://w3id.org/linkflows/superpattern/terms/generallyQualifier> rdfs:label "generally" .
<https://w3id.org/linkflows/superpattern/terms/hasCausalRelationWith> rdfs:label "A has causal relation with B" .
<https://w3id.org/linkflows/superpattern/terms/hasContextClass> rdfs:label "In the context of all things of type" .
<https://w3id.org/linkflows/superpattern/terms/hasDifferentValueFrom> rdfs:label "A has different value from B" .
<https://w3id.org/linkflows/superpattern/terms/hasLargerValueThan> rdfs:label "A has larger value than B" .
<https://w3id.org/linkflows/superpattern/terms/hasObjectClass> rdfs:label "... to things of type" .
<https://w3id.org/linkflows/superpattern/terms/hasQualifier> rdfs:label "... (qualifier)" .
<https://w3id.org/linkflows/superpattern/terms/hasRelation> rdfs:label "... have a relation of type" .
<https://w3id.org/linkflows/superpattern/terms/hasSameValueAs> rdfs:label "A has same value as B" .
<https://w3id.org/linkflows/superpattern/terms/hasSimilarValueAs> rdfs:label "A has similar value as B" .
<https://w3id.org/linkflows/superpattern/terms/hasSmallerValueThan> rdfs:label "A has smaller value than B" .
<https://w3id.org/linkflows/superpattern/terms/hasSpatiotemporalRelationWith> rdfs:label
"A has spatiotemporal relation with B" .
<https://w3id.org/linkflows/superpattern/terms/hasSubjectClass> rdfs:label "... things of type" .
<https://w3id.org/linkflows/superpattern/terms/includes> rdfs:label "A includes B" .
<https://w3id.org/linkflows/superpattern/terms/increases> rdfs:label "A increases B" .
<https://w3id.org/linkflows/superpattern/terms/inhibits> rdfs:label "A inhibits B" .
<https://w3id.org/linkflows/superpattern/terms/isCausedBy> rdfs:label "A is caused by B" .
<https://w3id.org/linkflows/superpattern/terms/isFollowedBy> rdfs:label "A is followed by B" .
<https://w3id.org/linkflows/superpattern/terms/isIncludedIn> rdfs:label "A is included in B" .
<https://w3id.org/linkflows/superpattern/terms/isNecessaryAndSufficientFor> rdfs:label
"A is necessary and sufficient for B" .
<https://w3id.org/linkflows/superpattern/terms/isNecessaryFor> rdfs:label "A is necessary for B" .
<https://w3id.org/linkflows/superpattern/terms/isSameAs> rdfs:label "A is same as B" .
<https://w3id.org/linkflows/superpattern/terms/isSufficientFor> rdfs:label "A is sufficient for B" .
<https://w3id.org/linkflows/superpattern/terms/mostlyNotQualifier> rdfs:label "mostly not" .
<https://w3id.org/linkflows/superpattern/terms/mostlyQualifier> rdfs:label "mostly" .
<https://w3id.org/linkflows/superpattern/terms/neverQualifier> rdfs:label "never" .
<https://w3id.org/linkflows/superpattern/terms/prevents> rdfs:label "A prevents B" .
<https://w3id.org/linkflows/superpattern/terms/requires> rdfs:label "A requires B" .
<https://w3id.org/linkflows/superpattern/terms/sometimesNotQualifier> rdfs:label "sometimes not" .
<https://w3id.org/linkflows/superpattern/terms/sometimesQualifier> rdfs:label "sometimes" .
}
sub:provenance {
sub:assertion prov:wasAttributedTo orcid:0000-0002-1267-0234 .
}
sub:pubinfo {
sub:sig npx:hasAlgorithm "RSA";
npx:hasPublicKey "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCwUtewGCpT5vIfXYE1bmf/Uqu1ojqnWdYxv+ySO80ul8Gu7m8KoyPAwuvaPj0lvPtHrg000qMmkxzKhYknEjq8v7EerxZNYp5B3/3+5ZpuWOYAs78UnQVjbHSmDdmryr4D4VvvNIiUmd0yxci47dTFUj4DvfHnGd6hVe5+goqdcwIDAQAB";
npx:hasSignature "dvsrvzFX0h//3pT68wwP2puSJXv9vnswPTJeqwToJs+vqyBnfa3EV4K18s77HX6HFzmsiopXe91Hz6gyKGYlkULO7aUeJgXf7MyN+n1+OI8DK2lSHVFyOGJmw4pZ7oWQrlpiQ56EfLohjDQLCXZwhSw19MTO4EAXkFoZH8BavVM=";
npx:hasSignatureTarget this: .
this: dcterms:created "2023-01-31T11:35:45.395+01:00"^^xsd:dateTime;
dcterms:creator orcid:0000-0002-1267-0234;
npx:supersedes <http://purl.org/np/RArBqei7AHw8x_vnT3nNybgkMSBT23NQgEy5vJgc43YlI>;
nt:wasCreatedFromProvenanceTemplate <http://purl.org/np/RANwQa4ICWS5SOjw7gp99nBpXBasapwtZF1fIM3H2gYTM>;
nt:wasCreatedFromPubinfoTemplate <http://purl.org/np/RAA2MfqdBCzmz9yVWjKLXNbyfBNcwsMmOqcNUxkk1maIM>,
<http://purl.org/np/RAjpBMlw3owYhJUBo3DtsuDlXsNAJ8cnGeWAutDVjuAuI>;
nt:wasCreatedFromTemplate <http://purl.org/np/RARI-clBK1koP34y4Trhbn1txQRs6Zjg9rMlO6S3FcPeY> .
}