Nanopublication

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ID

http://purl.org/np/RALHoHT9IowYzd70PoUx_izMLserXgm2y08vd0nnaXilI

Formats

.trig | .trig.txt | .jelly | .jelly.txt

Content

@prefix dcterms: <http://purl.org/dc/terms/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix this: <http://purl.org/np/RALHoHT9IowYzd70PoUx_izMLserXgm2y08vd0nnaXilI> .
@prefix sub: <http://purl.org/np/RALHoHT9IowYzd70PoUx_izMLserXgm2y08vd0nnaXilI#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix orcid: <https://orcid.org/> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix biolink: <https://w3id.org/biolink/vocab/> .
@prefix sepio: <http://purl.obolibrary.org/obo/SEPIO_> .
@prefix npx: <http://purl.org/nanopub/x/> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  sepio:0000145 rdfs:label "has evidence from source" .
  
  sepio:0000398 rdfs:label "has evidence type (ECO code)" .
  
  sub:assertion a nt:AssertionTemplate;
    rdfs:label "Adding evidences to a biomedical association";
    nt:hasStatement sub:st0, sub:st1, sub:st2, sub:st3, sub:st4, sub:st5, sub:st6, sub:st7,
      sub:st8, sub:st9 .
  
  sub:association a nt:LocalResource;
    rdfs:label "This association" .
  
  sub:evidence a nt:LocalResource;
    rdfs:label "This evidence" .
  
  sub:evidencedescription a nt:LiteralPlaceholder;
    rdfs:label "describe the evidence (e.g. quote the supporting text) here" .
  
  sub:evidencetype a nt:GuidedChoicePlaceholder;
    rdfs:label "add the evidence code from the evidence code ontology here";
    nt:possibleValue owl:Thing;
    nt:possibleValuesFromApi "http://data.bioontology.org/search?pagesize=5&apikey=fd451bec-eacd-4519-b972-90fb6c7007cb&ontologies=ECO&q=" .
  
  sub:evidenceuri a nt:UriPlaceholder;
    rdfs:label "add the URL to the source (e.g. DailyMed URL) of the evidence here" .
  
  sub:object a nt:UriPlaceholder;
    rdfs:label "add the object URI here" .
  
  sub:relation a nt:GuidedChoicePlaceholder;
    rdfs:label "add the BioLink relation here";
    nt:possibleValue owl:Thing;
    nt:possibleValuesFromApi "http://data.bioontology.org/search?pagesize=5&apikey=fd451bec-eacd-4519-b972-90fb6c7007cb&ontologies=BLM&q=" .
  
  sub:st0 a rdf:Statement;
    rdf:object biolink:Association;
    rdf:predicate rdf:type;
    rdf:subject sub:association;
    nt:statementOrder "0"^^xsd:integer .
  
  sub:st1 a rdf:Statement;
    rdf:object sub:subject;
    rdf:predicate biolink:subject;
    rdf:subject sub:association;
    nt:statementOrder "1"^^xsd:integer .
  
  sub:st2 a rdf:Statement;
    rdf:object sub:relation;
    rdf:predicate biolink:relation;
    rdf:subject sub:association;
    nt:statementOrder "2"^^xsd:integer .
  
  sub:st3 a rdf:Statement;
    rdf:object sub:object;
    rdf:predicate biolink:object;
    rdf:subject sub:association;
    nt:statementOrder "3"^^xsd:integer .
  
  sub:st4 a rdf:Statement;
    rdf:object sub:evidence;
    rdf:predicate biolink:has_evidence;
    rdf:subject sub:association;
    nt:statementOrder "4"^^xsd:integer .
  
  sub:st5 a rdf:Statement;
    rdf:object sub:evidence;
    rdf:predicate biolink:id;
    rdf:subject sub:evidence;
    nt:statementOrder "5"^^xsd:integer .
  
  sub:st6 a rdf:Statement;
    rdf:object sub:evidenceuri;
    rdf:predicate sepio:0000145;
    rdf:subject sub:evidence;
    nt:statementOrder "6"^^xsd:integer .
  
  sub:st7 a rdf:Statement;
    rdf:object sub:evidencedescription;
    rdf:predicate biolink:description;
    rdf:subject sub:evidence;
    nt:statementOrder "7"^^xsd:integer .
  
  sub:st8 a rdf:Statement;
    rdf:object biolink:Publication;
    rdf:predicate rdf:type;
    rdf:subject sub:evidence;
    nt:statementOrder "8"^^xsd:integer .
  
  sub:st9 a rdf:Statement;
    rdf:object sub:evidencetype;
    rdf:predicate sepio:0000398;
    rdf:subject sub:evidence;
    nt:statementOrder "9"^^xsd:integer .
  
  sub:subject a nt:UriPlaceholder;
    rdfs:label "add the subject URI here" .
  
  rdf:type rdfs:label "is a" .
  
  prov:wasQuotedFrom rdfs:label "was quoted from" .
  
  biolink:category rdfs:label "has type of evidence" .
  
  biolink:description rdfs:label "is described by" .
  
  biolink:has_evidence rdfs:label "has evidence" .
  
  biolink:id rdfs:label "has id" .
  
  biolink:object rdfs:label "has object" .
  
  biolink:relation rdfs:label "has relation" .
  
  biolink:subject rdfs:label "has subject" .
}

sub:provenance {
  sub:assertion prov:wasAttributedTo orcid:0000-0003-4727-9435 .
}

sub:pubinfo {
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCR9fz0fKCdWOWC+pxhkQhEM/ppbdIYe5TLSdj+lJzSlv9mYBaPgrzVezSwwbmhlHBPDZa4/vHycU315BdmUGq+pXllp9+rWFfrb+kBJwhZjpG6BeyyXBsRFz4jmQVxl/ZYHilQTh/XalYzKkEAyTiEMPee4Kz61PaWOKH24CsnOQIDAQAB";
    npx:hasSignature "XwjUPulHQnT1eOFQVOhfUuPHLvwpCzWg2XopBBtuQG9w9oSjRMdL1y0mKs3ze2aQB+Mq74wecBCictznVDQmH4BuRRZFTj1P47jTO7pyeVMmbsrcTeDWwmJnOaYa5INmbKIhuTXv72onRO6dtcbFA81JY2vKAuId12M1ztNRhXM=";
    npx:hasSignatureTarget this: .
  
  this: dcterms:creator orcid:0000-0003-4727-9435 .
}