@prefix dcterms: <http://purl.org/dc/terms/> .
@prefix this: <http://purl.org/np/RAFuSStyFTElQkUq9h7gkvEy4dvheo3KHup73-2YsF6e0> .
@prefix sub: <http://purl.org/np/RAFuSStyFTElQkUq9h7gkvEy4dvheo3KHup73-2YsF6e0#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix orcid: <https://orcid.org/> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix biolink: <https://w3id.org/biolink/vocab/> .
@prefix sepio: <http://purl.obolibrary.org/obo/SEPIO_> .
@prefix evi: <https://w3id.org/EVI#> .
@prefix dao: <https://w3id.org/dao/dao#> .
@prefix eco: <http://purl.obolibrary.org/obo/ECO_> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  eco:0000006 rdfs:label "experimental evidence" .
  
  eco:0000180 rdfs:label "clinical study evidence" .
  
  eco:0000204 rdfs:label "author statement" .
  
  eco:0000205 rdfs:label "curator inference" .
  
  eco:0000362 rdfs:label "computational inference" .
  
  eco:0005548 rdfs:label "biological system reconstruction evidence based on inference from background scientific knowledge" .
  
  eco:0006152 rdfs:label "medical practitioner statement evidence" .
  
  eco:0006153 rdfs:label "self-reported individual's statement evidence" .
  
  eco:0007672 rdfs:label "computational evidence" .
  
  sepio:0000145 rdfs:label "was quoted from" .
  
  sepio:0000398 rdfs:label "has evidence type (ECO code)" .
  
  sub:assertion a nt:AssertionTemplate;
    rdfs:label "Adding evidences to an association";
    nt:hasStatement sub:st00, sub:st01, sub:st02, sub:st03, sub:st04, sub:st05, sub:st06 .
  
  sub:confidencescore a nt:GuidedChoicePlaceholder;
    rdfs:label "add the evidence code from the evidence code ontology here";
    nt:possibleValue "0"^^xsd:integer, "0.1"^^xsd:decimal, "0.2"^^xsd:decimal, "0.3"^^xsd:decimal,
      "0.4"^^xsd:decimal, "0.5"^^xsd:decimal, "0.6"^^xsd:decimal, "0.7"^^xsd:decimal, "0.8"^^xsd:decimal,
      "0.9"^^xsd:decimal, "1"^^xsd:integer .
  
  sub:evidence a nt:LocalResource;
    rdfs:label "This evidence" .
  
  sub:evidencedescription a nt:LiteralPlaceholder;
    rdfs:label "provide a human-readable description of the evidence here, and how it supports or challenges the association" .
  
  sub:evidencerelation a nt:GuidedChoicePlaceholder;
    rdfs:label "define the evidence relation";
    nt:possibleValue evi:challengedBy, evi:indirectlyChallengedBy, evi:indirectlySupportedBy,
      evi:supportedBy, biolink:has_evidence;
    nt:possibleValuesFromApi "http://data.bioontology.org/search?pagesize=20&apikey=fd451bec-eacd-4519-b972-90fb6c7007cb&include_properties=true&ontologies=EVI&q=" .
  
  sub:evidencetype a nt:GuidedChoicePlaceholder;
    rdfs:label "add the evidence code from the evidence code ontology here";
    nt:possibleValue eco:0000000, eco:0000006, eco:0000180, eco:0000204, eco:0000205,
      eco:0000362, eco:0005548, eco:0006152, eco:0006153, eco:0007672;
    nt:possibleValuesFromApi "http://data.bioontology.org/search?pagesize=20&apikey=fd451bec-eacd-4519-b972-90fb6c7007cb&ontologies=ECO&q=" .
  
  sub:evidenceuri a nt:UriPlaceholder;
    rdfs:label "add the URL to the source of the evidence here (e.g. DailyMed publication)" .
  
  sub:st00 a rdf:Statement;
    rdf:object sub:evidence;
    rdf:predicate sub:evidencerelation;
    rdf:subject sub:thing;
    nt:statementOrder "0"^^xsd:integer .
  
  sub:st01 a rdf:Statement;
    rdf:object sub:evidenceuri;
    rdf:predicate sepio:0000145;
    rdf:subject sub:evidence;
    nt:statementOrder "1"^^xsd:integer .
  
  sub:st02 a rdf:Statement;
    rdf:object sub:evidencedescription;
    rdf:predicate biolink:description;
    rdf:subject sub:evidence;
    nt:statementOrder "2"^^xsd:integer .
  
  sub:st03 a nt:OptionalStatement;
    rdf:object sub:confidencescore;
    rdf:predicate biolink:has_confidence_level;
    rdf:subject sub:evidence;
    nt:statementOrder "6"^^xsd:integer .
  
  sub:st04 a nt:OptionalStatement;
    rdf:object sub:evidencetype;
    rdf:predicate sepio:0000398;
    rdf:subject sub:evidence;
    nt:statementOrder "3"^^xsd:integer .
  
  sub:st05 a rdf:Statement;
    rdf:object sub:evidence;
    rdf:predicate biolink:id;
    rdf:subject sub:evidence;
    nt:statementOrder "4"^^xsd:integer .
  
  sub:st06 a rdf:Statement;
    rdf:object biolink:EvidenceType;
    rdf:predicate rdf:type;
    rdf:subject sub:evidence;
    nt:statementOrder "5"^^xsd:integer .
  
  sub:thing a nt:UriPlaceholder;
    rdfs:label "The URI of the association you want to add an evidence to" .
  
  rdf:type rdfs:label "is a" .
  
  rdfs:label rdfs:label "asserts that" .
  
  prov:wasQuotedFrom rdfs:label "was quoted from" .
  
  biolink:EvidenceType rdfs:label "Evidence" .
  
  biolink:category rdfs:label "has type of evidence" .
  
  biolink:description rdfs:label "is described by" .
  
  biolink:has_confidence_level rdfs:label "has a confidence level of" .
  
  biolink:has_evidence rdfs:label "has evidence" .
  
  biolink:id rdfs:label "has id" .
  
  dao:context rdfs:label "has context" .
}

sub:provenance {
  sub:assertion prov:wasAttributedTo orcid:0000-0003-4727-9435 .
}

sub:pubinfo {
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCR9fz0fKCdWOWC+pxhkQhEM/ppbdIYe5TLSdj+lJzSlv9mYBaPgrzVezSwwbmhlHBPDZa4/vHycU315BdmUGq+pXllp9+rWFfrb+kBJwhZjpG6BeyyXBsRFz4jmQVxl/ZYHilQTh/XalYzKkEAyTiEMPee4Kz61PaWOKH24CsnOQIDAQAB";
    npx:hasSignature "YV3d8xIz4N0BJhVLWDcyGms8BPX2gTmRp6K3pWb5vtw+V/Hw4xtyPZJpcv8XRFUzJmfIsoSZ5P1S0RUWl+iH4esReXHejpIVE8M7EJlAJjwTcWBPthbD5wrIRihDz1UbI96/5j/ubjrIV+w1BxrnIAECGak94cZ7+NvpJzfFJPA=";
    npx:hasSignatureTarget this: .
  
  this: dcterms:created "2020-09-18T11:00:00+01:00"^^xsd:dateTime;
    dcterms:creator orcid:0000-0003-4727-9435;
    npx:supersedes <http://purl.org/np/RAGe8pO5920r9jTWFDxUlt3YUNrvRDqzapexGGqZ_q6SU> .
}