[ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/provenance", "@graph": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/assertion", "http://www.w3.org/ns/prov#wasAttributedTo": [ { "@id": "https://orcid.org/0000-0002-1784-2920" } ] } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/Head", "@graph": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok", "http://www.nanopub.org/nschema#hasAssertion": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/assertion" } ], "http://www.nanopub.org/nschema#hasProvenance": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/provenance" } ], "http://www.nanopub.org/nschema#hasPublicationInfo": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/pubinfo" } ], "@type": [ "http://www.nanopub.org/nschema#Nanopublication" ] } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/assertion", "@graph": [ { "@id": "http://edamontology.org/format_2333", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Binary format" } ] }, { "@id": "http://edamontology.org/format_3464", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "JSON" } ] }, { "@id": "http://edamontology.org/format_3508", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "PDF" } ] }, { "@id": "http://edamontology.org/format_3590", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "HDF5" } ] }, { "@id": "http://edamontology.org/format_3603", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "PNG" } ] }, { "@id": "http://edamontology.org/format_3650", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "NetCDF" } ] }, { "@id": "http://edamontology.org/format_3752", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "CSV" } ] }, { "@id": "http://edamontology.org/format_3915", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Zarr" } ] }, { "@id": "http://edamontology.org/format_3997", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "MPEG-4" } ] }, { "@id": "http://purl.org/dc/terms/creator", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "created by" } ] }, { "@id": "http://purl.org/dc/terms/description", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has description" } ] }, { "@id": "http://purl.org/dc/terms/license", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has license" } ] }, { "@id": "http://purl.org/dc/terms/title", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has title" } ] }, { "@id": "http://www.w3.org/ns/prov#wasDerivedFrom", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "improves upon method" } ] }, { "@id": "http://www.wikidata.org/entity/Q15777", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "C" } ] }, { "@id": "http://www.wikidata.org/entity/Q206904", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "R" } ] }, { "@id": "http://www.wikidata.org/entity/Q2407", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "C++" } ] }, { "@id": "http://www.wikidata.org/entity/Q28865", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Python" } ] }, { "@id": "https://codemeta.github.io/terms/hasInputFormat", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "expects input format" } ] }, { "@id": "https://codemeta.github.io/terms/hasOutputFormat", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "produces output format" } ] }, { "@id": "https://creativecommons.org/licenses/by/4.0/", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "CC-BY-4.0" } ] }, { "@id": "https://schema.org/actionPlatform", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "executable via" } ] }, { "@id": "https://schema.org/applicationCategory", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "serves purpose" } ] }, { "@id": "https://schema.org/applicationSubCategory", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "applies to domains" } ] }, { "@id": "https://schema.org/codeRepository", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has source repository" } ] }, { "@id": "https://schema.org/keywords", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has keywords" } ] }, { "@id": "https://schema.org/learningResourceType", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "uses computational approach" } ] }, { "@id": "https://schema.org/programmingLanguage", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "uses programming language" } ] }, { "@id": "https://schema.org/result", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "reports performance results" } ] }, { "@id": "https://schema.org/url", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "is accessible via" } ] }, { "@id": "https://spdx.org/licenses/Apache-2.0.html", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Apache 2.0" } ] }, { "@id": "https://spdx.org/licenses/BSD-3-Clause.html", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "BSD 3 Clause" } ] }, { "@id": "https://spdx.org/licenses/GPL-3.0.html", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "GPL 3.0" } ] }, { "@id": "https://spdx.org/licenses/MIT.html", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "MIT" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/applicable-domains", "@type": [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "applicable research domains" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi": [ { "@value": "https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search=" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/application-category", "@type": [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "primary computational purpose" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi": [ { "@value": "https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search=" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/assertion", "http://purl.org/dc/terms/description": [ { "@value": "Template for describing a Jupyter Notebook as a reusable computational method with semantic metadata for discovery and reuse tracking" } ], "@type": [ "https://w3id.org/np/o/ntemplate/AssertionTemplate" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Jupyter Notebook Computational Method" } ], "https://w3id.org/np/o/ntemplate/hasNanopubLabelPattern": [ { "@value": "Method: ${title}" } ], "https://w3id.org/np/o/ntemplate/hasStatement": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st01" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st02" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st03" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st04" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st05" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st06" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st07" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st08" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st09" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st10" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st11" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st12" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st13" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st14" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st15" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st16" }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st17" } ], "https://w3id.org/np/o/ntemplate/hasTag": [ { "@value": "Jupyter Method" } ], "https://w3id.org/np/o/ntemplate/hasTargetNanopubType": [ { "@id": "https://schema.org/SoftwareSourceCode" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st01", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://schema.org/SoftwareSourceCode" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://www.w3.org/1999/02/22-rdf-syntax-ns#type" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st02", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/title" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/title" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st03", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/description" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/description" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st04", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/zenodo-doi" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://schema.org/url" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st05", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/github-repo" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://schema.org/codeRepository" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ], "@type": [ "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st06", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/creator" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/creator" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ], "@type": [ "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st07", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/programming-language" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://schema.org/programmingLanguage" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st08", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/application-category" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://schema.org/applicationCategory" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st09", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/keywords" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://schema.org/keywords" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement", "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st10", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/input-format" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://codemeta.github.io/terms/hasInputFormat" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement", "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st11", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/output-format" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://codemeta.github.io/terms/hasOutputFormat" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement", "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st12", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/license" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/license" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st13", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/executable-url" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://schema.org/actionPlatform" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement", "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st14", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/base-method" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://www.w3.org/ns/prov#wasDerivedFrom" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement", "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st15", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/performance-metrics" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://schema.org/result" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement", "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st16", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/computational-approach" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://schema.org/learningResourceType" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement", "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/st17", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/applicable-domains" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://schema.org/applicationSubCategory" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement", "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/base-method", "@type": [ "https://w3id.org/np/o/ntemplate/UriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "method this improves upon (DOI or URI)" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/computational-approach", "@type": [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "computational approach used" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi": [ { "@value": "https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search=" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/creator", "@type": [ "https://w3id.org/np/o/ntemplate/UriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "ORCID of creator" } ], "https://w3id.org/np/o/ntemplate/hasPrefix": [ { "@value": "https://orcid.org/" } ], "https://w3id.org/np/o/ntemplate/hasPrefixLabel": [ { "@value": "ORCID (just the 16-digit ID)" } ], "https://w3id.org/np/o/ntemplate/hasRegex": [ { "@value": "0000-\\d{4}-\\d{4}-\\d{4}" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/description", "@type": [ "https://w3id.org/np/o/ntemplate/LongLiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "description of what the method does" } ], "https://w3id.org/np/o/ntemplate/hasRegex": [ { "@value": "[\\s\\S]{10,1000}" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/executable-url", "@type": [ "https://w3id.org/np/o/ntemplate/UriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "direct link to execute this notebook online (e.g. binder)" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/github-repo", "@type": [ "https://w3id.org/np/o/ntemplate/UriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "GitHub repository URL" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/input-format", "@type": [ "https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "expected input data format" } ], "https://w3id.org/np/o/ntemplate/possibleValue": [ { "@id": "http://edamontology.org/format_2333" }, { "@id": "http://edamontology.org/format_3464" }, { "@id": "http://edamontology.org/format_3590" }, { "@id": "http://edamontology.org/format_3591" }, { "@id": "http://edamontology.org/format_3620" }, { "@id": "http://edamontology.org/format_3650" }, { "@id": "http://edamontology.org/format_3752" }, { "@id": "http://edamontology.org/format_3915" }, { "@id": "http://edamontology.org/format_3997" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/keywords", "@type": [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "research keywords from Wikidata" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi": [ { "@value": "https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search=" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/license", "@type": [ "https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "software license" } ], "https://w3id.org/np/o/ntemplate/possibleValue": [ { "@id": "https://creativecommons.org/licenses/by/4.0/" }, { "@id": "https://spdx.org/licenses/Apache-2.0.html" }, { "@id": "https://spdx.org/licenses/BSD-3-Clause.html" }, { "@id": "https://spdx.org/licenses/GPL-3.0.html" }, { "@id": "https://spdx.org/licenses/MIT.html" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/notebook", "@type": [ "https://w3id.org/np/o/ntemplate/UriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "URI of the Jupyter Notebook method" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/output-format", "@type": [ "https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "produced output format" } ], "https://w3id.org/np/o/ntemplate/possibleValue": [ { "@id": "http://edamontology.org/format_2333" }, { "@id": "http://edamontology.org/format_3464" }, { "@id": "http://edamontology.org/format_3508" }, { "@id": "http://edamontology.org/format_3590" }, { "@id": "http://edamontology.org/format_3603" }, { "@id": "http://edamontology.org/format_3650" }, { "@id": "http://edamontology.org/format_3752" }, { "@id": "http://edamontology.org/format_3915" }, { "@id": "http://edamontology.org/format_3997" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/performance-metrics", "@type": [ "https://w3id.org/np/o/ntemplate/LongLiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "quantitative performance measurements" } ], "https://w3id.org/np/o/ntemplate/hasRegex": [ { "@value": "[\\s\\S]{10,1000}" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/programming-language", "@type": [ "https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "primary programming language" } ], "https://w3id.org/np/o/ntemplate/possibleValue": [ { "@id": "http://www.wikidata.org/entity/Q15777" }, { "@id": "http://www.wikidata.org/entity/Q206904" }, { "@id": "http://www.wikidata.org/entity/Q2407" }, { "@id": "http://www.wikidata.org/entity/Q28865" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/title", "@type": [ "https://w3id.org/np/o/ntemplate/LiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "title of the computational method" } ], "https://w3id.org/np/o/ntemplate/hasRegex": [ { "@value": "[\\s\\S]{5,200}" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/zenodo-doi", "@type": [ "https://w3id.org/np/o/ntemplate/UriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Zenodo DOI URL" } ], "https://w3id.org/np/o/ntemplate/hasPrefix": [ { "@value": "https://doi.org/" } ], "https://w3id.org/np/o/ntemplate/hasPrefixLabel": [ { "@value": "DOI (starting with '10.')" } ], "https://w3id.org/np/o/ntemplate/hasRegex": [ { "@value": "10.(\\d)+/(\\S)+" } ] } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/pubinfo", "@graph": [ { "@id": "https://orcid.org/0000-0002-1784-2920", "http://xmlns.com/foaf/0.1/name": [ { "@value": "Anne Fouilloux" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok", "http://purl.org/dc/terms/created": [ { "@value": "2025-08-14T10:39:03.017Z", "@type": "http://www.w3.org/2001/XMLSchema#dateTime" } ], "http://purl.org/dc/terms/creator": [ { "@id": "https://orcid.org/0000-0002-1784-2920" } ], "http://purl.org/dc/terms/license": [ { "@id": "https://creativecommons.org/licenses/by/4.0/" } ], "http://purl.org/nanopub/x/supersedes": [ { "@id": "https://w3id.org/np/RAOoA0jeNNm9bmjqkomgGxbok73YaP5shI44P-l6ettzs" } ], "http://purl.org/nanopub/x/wasCreatedAt": [ { "@id": "https://nanodash.knowledgepixels.com/" } ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Template: Jupyter Notebook Computational Method" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromProvenanceTemplate": [ { "@id": "https://w3id.org/np/RA7lSq6MuK_TIC6JMSHvLtee3lpLoZDOqLJCLXevnrPoU" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate": [ { "@id": "https://w3id.org/np/RA0J4vUn_dekg-U1kK3AOEt02p9mT2WO03uGxLDec1jLw" }, { "@id": "https://w3id.org/np/RAoTD7udB2KtUuOuAe74tJi1t3VzK0DyWS7rYVAq1GRvw" }, { "@id": "https://w3id.org/np/RAukAcWHRDlkqxk7H2XNSegc1WnHI569INvNr-xdptDGI" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromTemplate": [ { "@id": "https://w3id.org/np/RA5reLVXOCPQFWr2UiCJb19ES7NwOpQRmudb17e2iB0c4" } ] }, { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok/sig", "http://purl.org/nanopub/x/hasAlgorithm": [ { "@value": "RSA" } ], "http://purl.org/nanopub/x/hasPublicKey": [ { "@value": "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQDWv2pJnmDsBOq8OlT1aSvYXSuWT34WOp4FYqEzdnn2F0kqzcFevBqWGZDxJWC0lqCrDEuNfp2QFyPe/+nES9dlHGYIhqPi68fwK6ZiNUotRFxXou+rjFznVvUxtCL8Ede79EBHwWN61QtwSIcU12bLoZsNPFlqQASQ93BJuKlihwIDAQAB" } ], "http://purl.org/nanopub/x/hasSignature": [ { "@value": "GYcvbhSaMr5rQLtij1d3hmhTrkNmKqIDNPYO/ATvFGzWqi49hiRjnA6cRoYRVeXQS8VNvnmx1HUd9T+3qge5dX32spNx2322WRdpQzZ8OHIGVVYpcojlmmmXK+w0xMzytQOymnX8vEvv4n+E7JHdFHkTEK0TJWcvEKnY+EID9r8=" } ], "http://purl.org/nanopub/x/hasSignatureTarget": [ { "@id": "https://w3id.org/np/RAEPNaZToISK5x3tTRcBlG5olZawQ75UPVqF5uOXuelok" } ], "http://purl.org/nanopub/x/signedBy": [ { "@id": "https://orcid.org/0000-0002-1784-2920" } ] } ] } ]