http://purl.org/np/RA9-O4kdjZCBp4pafOOJ4YB4c7SE55TUqM6FFXLeVHHDU
.trig | .trig.txt | .jelly | .jelly.txt
@prefix this: <http://purl.org/np/RA9-O4kdjZCBp4pafOOJ4YB4c7SE55TUqM6FFXLeVHHDU> .
@prefix sub: <http://purl.org/np/RA9-O4kdjZCBp4pafOOJ4YB4c7SE55TUqM6FFXLeVHHDU#> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
sub:Head {
this: a np:Nanopublication;
np:hasAssertion sub:assertion;
np:hasProvenance sub:provenance;
np:hasPublicationInfo sub:pubinfo .
}
sub:assertion {
<http://purl.obolibrary.org/obo/NOMEN_0000017> rdfs:label "synonym" .
<http://purl.obolibrary.org/obo/NOMEN_0000096> rdfs:label "ICNP synonym" .
<http://purl.obolibrary.org/obo/NOMEN_0000101> rdfs:label "ICNP homotypic synonym" .
<http://purl.obolibrary.org/obo/NOMEN_0000102> rdfs:label "ICNP heterotypic synonym" .
<http://purl.obolibrary.org/obo/NOMEN_0000276> rdfs:label "ICZN synonym" .
<http://purl.obolibrary.org/obo/NOMEN_0000277> rdfs:label "ICZN objective synonym" .
<http://purl.obolibrary.org/obo/NOMEN_0000285> rdfs:label "ICZN subjective synonym" .
<http://purl.obolibrary.org/obo/NOMEN_0000287> rdfs:label "ICZN synonymic homonym" .
<http://purl.obolibrary.org/obo/NOMEN_0000372> rdfs:label "ICN synonym" .
<http://purl.obolibrary.org/obo/NOMEN_0000392> rdfs:label "ICN heterotypic synonym" .
<http://purl.obolibrary.org/obo/NOMEN_0000393> rdfs:label "ICN homotypic synonym" .
sub:assertion a nt:AssertionTemplate;
dct:description "<p>Such a nanopublication expresses a relation of synonymy between two organism taxons.</p>";
rdfs:label "Expressing a synonymy association between two taxon names";
nt:hasDefaultProvenance <http://purl.org/np/RA2VjRiJ5AsNnPHDXuOqvsEJwTwqtj5rBb-OFkpPOzd9s>;
nt:hasNanopubLabelPattern "${subjtaxonname} - ${relation} - ${objtaxonname}";
nt:hasStatement sub:st00, sub:st05, sub:st10, sub:st11, sub:st12, sub:st40, sub:st41,
sub:st42, sub:st60;
nt:hasTag "Biodiversity";
nt:hasTargetNanopubType <http://purl.obolibrary.org/obo/NOMEN_0000017> .
sub:association a nt:IntroducedResource, nt:LocalResource;
rdfs:label "this association" .
sub:comment a nt:LongLiteralPlaceholder;
rdfs:label "short explanation related to the above statement" .
sub:objtaxon a nt:LocalResource;
rdfs:label "the object taxon concept" .
sub:objtaxondef a nt:ExternalUriPlaceholder;
rdfs:label "publication DOI (https://doi.org/...) or taxon treatment ID (https://treatment.plazi.org/id/...)";
nt:hasRegex "(https://doi.org/|https://treatment.plazi.org/id/).+" .
sub:objtaxonname a nt:GuidedChoicePlaceholder;
rdfs:label "search and select from list (if not found, you may paste identifying URI from IPNI, MycoBank, Index Fungorum, or Zoobank)";
nt:possibleValuesFromApi "https://vodex.petapico.org/nidx/query?rows=100&q=label:" .
sub:relation a nt:RestrictedChoicePlaceholder;
rdfs:label "the type of synonymy relation between the two taxa";
nt:hasDefaultValue <http://purl.obolibrary.org/obo/NOMEN_0000017>;
nt:possibleValue <http://purl.obolibrary.org/obo/NOMEN_0000017>, <http://purl.obolibrary.org/obo/NOMEN_0000096>,
<http://purl.obolibrary.org/obo/NOMEN_0000101>, <http://purl.obolibrary.org/obo/NOMEN_0000102>,
<http://purl.obolibrary.org/obo/NOMEN_0000276>, <http://purl.obolibrary.org/obo/NOMEN_0000277>,
<http://purl.obolibrary.org/obo/NOMEN_0000285>, <http://purl.obolibrary.org/obo/NOMEN_0000287>,
<http://purl.obolibrary.org/obo/NOMEN_0000372>, <http://purl.obolibrary.org/obo/NOMEN_0000392>,
<http://purl.obolibrary.org/obo/NOMEN_0000393> .
sub:st00 rdf:object <https://w3id.org/biolink/vocab/OrganismTaxonToOrganismTaxonAssociation>;
rdf:predicate rdf:type;
rdf:subject sub:association .
sub:st05 rdf:object sub:relation;
rdf:predicate <https://w3id.org/biolink/vocab/predicate>;
rdf:subject sub:association .
sub:st10 rdf:object sub:subjtaxon;
rdf:predicate <https://w3id.org/biolink/vocab/subject>;
rdf:subject sub:association .
sub:st11 rdf:object sub:subjtaxonname;
rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonName>;
rdf:subject sub:subjtaxon .
sub:st12 a nt:OptionalStatement;
rdf:object sub:subjtaxondef;
rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition>;
rdf:subject sub:subjtaxon .
sub:st40 rdf:object sub:objtaxon;
rdf:predicate <https://w3id.org/biolink/vocab/object>;
rdf:subject sub:association .
sub:st41 rdf:object sub:objtaxonname;
rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonName>;
rdf:subject sub:objtaxon .
sub:st42 a nt:OptionalStatement;
rdf:object sub:objtaxondef;
rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition>;
rdf:subject sub:objtaxon .
sub:st60 a nt:OptionalStatement;
rdf:object sub:comment;
rdf:predicate rdfs:comment;
rdf:subject sub:association .
sub:subjtaxon a nt:LocalResource;
rdfs:label "the subject taxon concept" .
sub:subjtaxondef a nt:ExternalUriPlaceholder;
rdfs:label "publication DOI (https://doi.org/...) or taxon treatment ID (https://treatment.plazi.org/id/...)";
nt:hasRegex "(https://doi.org/|https://treatment.plazi.org/id/).+" .
sub:subjtaxonname a nt:GuidedChoicePlaceholder;
rdfs:label "search and select from list (if not found, you may paste identifying URI from IPNI, MycoBank, Index Fungorum, or Zoobank)";
nt:possibleValuesFromApi "https://vodex.petapico.org/nidx/query?rows=100&q=label:" .
rdf:type rdfs:label "is a" .
rdfs:comment rdfs:label "has the free-text comment" .
<https://w3id.org/biolink/vocab/OrganismTaxonToOrganismTaxonAssociation> rdfs:label
"synonymy association between two organism taxa" .
<https://w3id.org/biolink/vocab/object> rdfs:label "refers to - links this association to its first taxon" .
<https://w3id.org/biolink/vocab/predicate> rdfs:label "refers to the synonymy relation" .
<https://w3id.org/biolink/vocab/subject> rdfs:label "refers to - links an association to its second taxon" .
<https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition> rdfs:label "is used as defined in" .
<https://w3id.org/kpxl/biodiv/terms/hasTaxonName> rdfs:label "has the name - links a taxon concept to its name" .
}
sub:provenance {
sub:assertion prov:wasAttributedTo orcid:0000-0002-1267-0234 .
}
sub:pubinfo {
sub:sig npx:hasAlgorithm "RSA";
npx:hasPublicKey "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCjDGQCS1S+SRnERDuYDXOugdYUP0efEquHJEEHAbU/uLzBVlga89zqrNPCS7fBE6lArBUWEmT8eLKdMapyqvAzI1J3jUWTMhDJF+XFBkUiuiFfNSc4vJJcmi0yujtnuzXsRIG202jyaP4f5ULoskFwaZOSBZJfiE0dsB3D7DTIAQIDAQAB";
npx:hasSignature "lEbiB1kQEPUIC6WKDYgkKyvGacAoCdnPATqolnlnfzfnu2UJtvZPWZ2OUQy2/OkRqVCla1o7GnKJetvN9C1Ddya7J9koVVyYTBAPbqMw3uXjdems3HWXMwaswbSuQ1KUEf/930bl0EH+P/0uoRgQ5yxrDAUqYeuQ9BJhZaCDwYY=";
npx:hasSignatureTarget this: .
this: dct:created "2023-08-15T13:29:18.431Z"^^xsd:dateTime;
dct:creator orcid:0000-0002-1267-0234;
dct:license <https://creativecommons.org/licenses/by/4.0/>;
npx:supersedes <http://purl.org/np/RAFZVCvFTwhuGWf7nzovfrWipaPUZbqeYw99XtL5q6KL8>;
rdfs:label "Template: Expressing a synonymy association between two taxon names";
nt:wasCreatedFromProvenanceTemplate <http://purl.org/np/RANwQa4ICWS5SOjw7gp99nBpXBasapwtZF1fIM3H2gYTM>;
nt:wasCreatedFromPubinfoTemplate <http://purl.org/np/RAA2MfqdBCzmz9yVWjKLXNbyfBNcwsMmOqcNUxkk1maIM>,
<http://purl.org/np/RAh1gm83JiG5M6kDxXhaYT1l49nCzyrckMvTzcPn-iv90>, <http://purl.org/np/RAjpBMlw3owYhJUBo3DtsuDlXsNAJ8cnGeWAutDVjuAuI>;
nt:wasCreatedFromTemplate <http://purl.org/np/RANjqEfLnGSzLuq0heRSXN0psYWW0oX4v3W8w7osb3xfs> .
}